BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024D02LP1|AL428202
(1002 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig774 1276 0.0
3x_Contig1253 615 e-176
>3x_Contig774
Length = 2612
Score = 1276 bits (643), Expect = 0.0
Identities = 650/653 (99%)
Strand = Plus / Minus
Query: 350 tatctaatccaaattctagttctctttctaatcctaaaaggtcatttatatcttggcact 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2600 tatctaatccaaattctagttctctttctaatcctaaaaggtcatttatatcttggcact 2541
Query: 410 caggagagccgttatgcgtttgctgatgacttagacccattggcgaatctagcacattct 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2540 caggagagccgttatgcgtttgctgatgacttagacccattggcgaatctagcacattct 2481
Query: 470 cactaggcctaggagggaagtcaagttcatggcttggtaaattatccgaatgaataccaa 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2480 cactaggcctaggagggaagtcaagttcatggcttggtaaattatccgaatgaataccaa 2421
Query: 530 caagaggatcttgttgtgacgcggaacccatcatttgactagaaaacggctcatcgaacg 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2420 caagaggatcttgttgtgacgcggaacccatcatttgactagaaaacggctcatcgaacg 2361
Query: 590 atggaacgttagatgcagttctaccattgttcacttgttcttctagctgcgcttgaaatg 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2360 atggaacgttagatgcagttctaccattgttcacttgttcttctagctgcgcttgaaatg 2301
Query: 650 tgcgttgatcttctcgtatttgatcatcaaaaccaccgtctgtcttcccctgttgttgct 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2300 tgcgttgatcttctcgtatttgatcatcaaaaccaccgtctgtcttcccctgttgttgct 2241
Query: 710 gttgctcgtgtaagaggggtaatctcacatattgcctgaaatcggtcacttcgtcaatta 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2240 gttgctcgtgtaagaggggtaatctcacatattgcctgaaatcggtcacttcgtcaatta 2181
Query: 770 ccatttgtttaagttgttcaatctcattgacactttcaaaagaaaaatcgaacttttctg 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2180 ccatttgtttaagttgttcaatctcattgacactttcaaaagaaaaatcgaacttttctg 2121
Query: 830 tacatatcggttcatctgcaggatcatgccagatggacaaatacggatgttgtagagcat 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2120 tacatatcggttcatctgcaggatcatgccagatggacaaatacggatgttgtagagcat 2061
Query: 890 catcgactgttattctaagttgaggatcaaagcttaacattccctcaagaaggttcaatg 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2060 catcgactgttattctaagttgaggatcaaagcttaacattccctcaagaaggttcaatg 2001
Query: 950 catccgggttggcatttgggtataaagtgctgaatkgtatcttttggatatat 1002
||||||||||||||||||||||||||||||||||| |||||||| | ||||||
Sbjct: 2000 catccgggttggcatttgggtataaagtgctgaatggtatctttggaatatat 1948
>3x_Contig1253
Length = 5628
Score = 615 bits (310), Expect = e-176
Identities = 324/328 (98%), Gaps = 1/328 (0%)
Strand = Plus / Minus
Query: 4 ataacattcaggaccgtgtaaaa-attatcatacagatttgatcaattgcatgacttttg 62
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 344 ataacattcaggaccgtgtaacatattatcatacagatttgatcaattgcatgacttttg 285
Query: 63 gctgtttacagtctgcagctgcacttgtttcagcagaaaattcgggtatgatacatttgt 122
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 284 gctgtttacagtctgcagctgcacttgtttcagcagacaattcgggtatgatacatttgt 225
Query: 123 atatgcttcaaaagtagtcgattaaccaaattacactatctcagttctttatagaatatg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 atatgcttcaaaagtagtcgattaaccaaattacactatctcagttctttatagaatatg 165
Query: 183 agaacatgagtwtcttcgtattcactgaagctgccagttttatgattgttatttgatgtg 242
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 agaacatgagtatcttcgtattcactgaagctgccagttttatgattgttatttgatgtg 105
Query: 243 taaatttgtacaaaggcatttcacgtatagcagaatctgagcaacaatttatgttctaca 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 taaatttgtacaaaggcatttcacgtatagcagaatctgagcaacaatttatgttctaca 45
Query: 303 aagagagtggatgaagctatataccaga 330
||||||||||||||||||||||||||||
Sbjct: 44 aagagagtggatgaagctatataccaga 17
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7399
Number of Sequences: 1807
Number of extensions: 7399
Number of successful extensions: 91
Number of sequences better than 1.0e-20: 2
length of query: 1002
length of database: 10,358,551
effective HSP length: 16
effective length of query: 986
effective length of database: 10,329,639
effective search space: 10185024054
effective search space used: 10185024054
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)